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Update dependency autoflake to v2.3.1 #2194

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Run time

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Job	Run time
bandit	16s
black	18s
build-devbox-image	1m 6s
build-docs	32s
flake8	16s
isort	19s
mypy	31s
test (3.8)	31s
test (3.9)	28s
update-dev-docs	0s
test (3.10)	32s
verify-wheel (3.8)	18s
test (3.11)	30s
verify-wheel (3.9)	21s
test (3.12)	35s
verify-wheel (3.10)	16s
verify-wheel (3.11)	14s
verify-wheel (3.12)	20s
	7m 23s