change extract_features to flip x and y for the segmentation methods

yuqiyuqitan · Apr 11, 2024 · 3914b1c · 3914b1c
1 parent ec47f3b
commit 3914b1c
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/src/spacec/tools/_segmentation.py b/src/spacec/tools/_segmentation.py
@@ -249,8 +249,8 @@ def extract_features(
     markers = mean_df.join(props_df)
 
     # rename column
-    markers.rename(columns={"centroid-0": "x"}, inplace=True)
-    markers.rename(columns={"centroid-1": "y"}, inplace=True)
+    markers.rename(columns={"centroid-0": "y"}, inplace=True)
+    markers.rename(columns={"centroid-1": "x"}, inplace=True)
 
     # Export to CSV
     markers.to_csv(output_file)