update pip version comparative-annotation-toolkit dockerfile #252
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| name: Build and Push Docker Images with Version Tags | |
| on: | |
| push: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| env: | |
| ORG_NAME: eichlerlab | |
| jobs: | |
| build-and-push: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| - name: Find Dockerfiles that need to be updated | |
| id: dockerfiles | |
| run: | | |
| set +e | |
| CHANGED_FILES=$(git diff-tree --no-commit-id --name-only -r HEAD | grep 'Dockerfile$\|environment.yml$') | |
| echo $CHANGED_FILES | |
| set -e | |
| CHANGED_IMAGES="" | |
| for CHANGED_FILE in $CHANGED_FILES; do | |
| echo $CHANGED_FILE | |
| echo $CHANGED_FILE | awk -F'/' '{print NF}' | |
| if [[ -f "$CHANGED_FILE" && $(echo $CHANGED_FILE | awk -F'/' '{print NF}') -eq 3 ]]; then | |
| CHANGED_IMAGE=$(echo $CHANGED_FILE | cut -d"/" -f1-2) | |
| CHANGED_IMAGES="$CHANGED_IMAGE $CHANGED_IMAGES" | |
| fi | |
| done | |
| CHANGED_IMAGES=$(echo $CHANGED_IMAGES | awk '{for (i=1; i<=NF; i++) if (!seen[$i]++) printf "%s ", $i}' | sed 's/ $//g') | |
| echo $CHANGED_IMAGES | |
| if [[ -z "$CHANGED_IMAGES" ]]; then | |
| echo "CHANGED=false" >> $GITHUB_ENV | |
| echo "No Docker image changes detected." | |
| exit 0 | |
| else | |
| echo "CHANGED_IMAGES=$CHANGED_IMAGES" >> $GITHUB_ENV | |
| echo "CHANGED=true" >> $GITHUB_ENV | |
| echo "Changed Docker images: $CHANGED_IMAGES" | |
| fi | |
| echo $CHANGED_IMAGES | |
| - name: Log in to Docker Hub | |
| if: env.CHANGED == 'true' | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKER_USER_1 }} | |
| password: ${{ secrets.DOCKER_USER_1_PAT }} | |
| - name: Build and push Docker images | |
| if: env.CHANGED == 'true' | |
| run: | | |
| CHANGED_IMAGES="${{ env.CHANGED_IMAGES }}" | |
| for CHANGED_IMAGE in $CHANGED_IMAGES; do | |
| IFS='/' read -ra ADDR <<< "$CHANGED_IMAGE" | |
| SOFTWARE="${ADDR[0]}" | |
| VERSION="${ADDR[1]}" | |
| IMAGE_PATH="${SOFTWARE}/${VERSION}" | |
| if ! docker build -t ${{ env.ORG_NAME }}/${SOFTWARE}:${VERSION} $IMAGE_PATH;then | |
| echo "Failed to build ${SOFTWARE}:${VERSION}" | |
| exit 1 | |
| fi | |
| echo "Pushing ${{ env.ORG_NAME }}/${SOFTWARE}:${VERSION}" | |
| docker push ${{ env.ORG_NAME }}/${SOFTWARE}:${VERSION} | |
| done |