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Ligand Sterimol Tool

Tony Schaefer edited this page Jul 6, 2021 · 2 revisions

This tool can be used to calculate the L, B1, B2, B3, B4, and B5 Sterimol parameter values for a ligand.

To calculate the Sterimol parameters, select a ligand that has either a covalent bond or a metal coordination pseudobond to another atom. Then click 'calculate parameters for selected ligands'.

The tool can also calculate Sterimol2Vec parameters, developed by the Paton group. These are the widths (B1-B5) at a certain distance from the center. The tool calculates the Sterimol2Vec parameters one L value at a time.

Parameters can be exported in CSV format to your clipboard or to a CSV file.