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16 Open 253 Closed
16 Open 253 Closed
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Issues list

How to save the result with annotation and co-occurance? how to subset and establish the certain group?
#367 opened Dec 31, 2024 by jiangli2941
why 'center_coordinates' in read_gem(), but not in read_gef()?
#366 opened Dec 18, 2024 by z-spider
1
How to fix this!?
#365 opened Dec 13, 2024 by Thelistener666
How to fix this?
#364 opened Dec 12, 2024 by Thelistener666
2
Something problem with batch QC
#360 opened Dec 6, 2024 by jiangli2941
9
Failed to remove batch effect
#358 opened Dec 2, 2024 by Somnvs
8
LinAlgError: Singular matrix error when running sctransform on multi-sample data
#351 opened Nov 7, 2024 by aadimator
Calculation of ambiguous counts for RNA velocity
#345 opened Oct 16, 2024 by MarcelloZago
1
interact_spatial_scatter notworking
#330 opened Sep 10, 2024 by solivehong
3
SingleR diagnostics about the annotation process
#329 opened Sep 10, 2024 by BioRB
How to find down markers? How to distinguish between up and down genes?
#271 opened May 6, 2024 by Ma-hz
offset value tollerance
#252 opened Mar 14, 2024 by BioRB
Connectivity for spatial_neighbors on cell_bin data
#245 opened Feb 26, 2024 by garrick-chang
why the code for import image into seurat object is disabled by default in the latest h5ad2rds.R?
#244 opened Feb 23, 2024 by zhangyz1997
5
Segmentation fault(core dumped) on tissue_extraction_to_bgef
#224 opened Dec 12, 2023 by OswaldZhang
2
how to change a seurat file into stereopy
#205 opened Oct 23, 2023 by Dan-121
2
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