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Htsget BAM to implementation for file interface#49

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aaliomer wants to merge 22 commits intogooglegenomics:masterfrom aaliomer:master

+822-1

Commits on Feb 9, 2019

added file, reads and block packages
Aliomer, Ayad
committed
added a block server implementation. testing still needed
Aliomer, Ayad
committed
added a reader gin handler
Aliomer, Ayad
committed
added boot strapped reads handler
Aliomer, Ayad
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added a todo to reads.go
Aliomer, Ayad
committed

Commits on Feb 11, 2019

moved the router code outside the conditionals
Aliomer, Ayad
committed
test failed. fixed it
Aliomer, Ayad
committed
read returns actual read bytes and resets start and end based on that
Aliomer, Ayad
committed
check of byte read length
Aliomer, Ayad
committed
added test file and got rid of junk
Aliomer, Ayad
committed
added base url to the reads
Aliomer, Ayad
committed
todo
Aliomer, Ayad
committed

Commits on Feb 12, 2019

added getting ref id int from ref string+ added sam test
Aliomer, Ayad
committed
bug
Aliomer, Ayad
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made some tests
Aliomer, Ayad
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fixed the test and created a model file
Aliomer, Ayad
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added a comment on blcok handler
Aliomer, Ayad
committed

Commits on Feb 13, 2019

bug fixes
Aliomer, Ayad
committed
added close defer
Aliomer, Ayad
committed
added docker container
Aliomer, Ayad
committed
fixed block size bug
Aliomer, Ayad
committed
deleted some files
Aliomer, Ayad
committed