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PATO v1.0.2

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@valflanza valflanza released this 31 Jan 17:00
· 41 commits to master since this release

PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species. It allows to analyze the core-genome, accessory genome and whole genome, the population structure, and the horizontal gene transfer dynamics. PATO uses, as core software, MASH , MMSeq2, Minimap2 and R.