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Issues list

Correct command question for trimming to a fixed length
#59 opened Jun 28, 2023 by FaehlingT
sickle not found though installed.
#58 opened Nov 10, 2022 by skr3178
WARNING: PE file 2 is shorter than PE file 1
#57 opened Dec 13, 2020 by vappiah
Using -g increases runtime
#56 opened Dec 4, 2020 by PelFritz
questions about filtering out reads based on the first 3 bases quality in reads before adaptor trimming
#55 opened Jul 23, 2020 by santataRU
Not an issue but questions
#54 opened Apr 16, 2020 by FritzPeleke
2
No annotation for the options
#53 opened Sep 19, 2018 by MiltonKoB
"Segmentation fault (core dumped)" depending on parameters naming
#52 opened Jun 22, 2017 by rioualen
2
bioconda
#50 opened Feb 2, 2017 by dridk
2
Quality Scores in illumina reads too low
#47 opened Feb 17, 2016 by tobsecret
2
Citable DOI for repository via Zenodo
#46 opened Nov 23, 2015 by jdblischak
Can't chose window size
#42 opened Jun 12, 2015 by xapple
1
Different quality and length thresholds for paired-end and single-end reads
#37 opened Oct 21, 2014 by jdidion
segfault on empty reads
#32 opened Aug 13, 2014 by roryk
10
differerence in number of kept reads between with and without 5' trimming?
#24 opened May 8, 2014 by biocyberman
2
Trimming colorspace reads
#23 opened May 7, 2014 by biocyberman
1
ProTip! Exclude everything labeled bug with -label:bug.