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Dev -> Master 2.7.0 #420

Merged
merged 198 commits into from
Oct 25, 2024
Merged

Dev -> Master 2.7.0 #420

merged 198 commits into from
Oct 25, 2024

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sateeshperi
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sateeshperi and others added 30 commits January 6, 2024 00:42
post-release dev bump version and snapshots
add missing comma
Important! Template update for nf-core/tools v2.12
Following the template
Important! Template update for nf-core/tools v2.13
Important! Template update for nf-core/tools v2.13.1
Samplesheet input section was duplicated
remove duplicate section from usage.md
This should now have both unique samples and samples that need to be merged for both single-end and paired-end scenarios.
Switching R1 and R2 round for the last test merge, which should also work (both for merging and for processing even though it won't align in directional mode).
docs/images/metromap.svg Outdated Show resolved Hide resolved
main.nf Outdated
Comment on lines 29 to 32
params.fasta = getGenomeAttribute('fasta')
params.fasta_index = getGenomeAttribute('fasta_index')
params.bismark_index = getGenomeAttribute('bismark')
params.bwameth_index = getGenomeAttribute('bwameth')
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and this works well, coming from the workflow?

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yes.....thats why im a bit amazed that it doesn't work for others 🤷

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@mashehu mashehu left a comment

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didn't really check, just want to trigger an action

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@ewels ewels left a comment

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:shipit:

sateeshperi and others added 2 commits October 24, 2024 19:10
apply suggestions from nextflow vscode formatter + update date in cha…
@sateeshperi sateeshperi merged commit aac172d into master Oct 25, 2024
60 of 68 checks passed
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