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Running the same sample multiple times results in different PASS/FAIL result
help wanted
Extra attention is needed
#39
by kmavrommatis
was closed Jan 23, 2025
Warning message after changing Extra attention is needed
min_absolute_karyotype_mutations
help wanted
#36
by mkyriak
was closed Jun 28, 2024
Select desidered karyotypses for phasing mutations
enhancement
New feature or request
#35
by nicola-calonaci
was closed Apr 11, 2024
Enhancements to plot_segments function?
enhancement
New feature or request
help wanted
Extra attention is needed
#34
by sigven
was closed Jun 10, 2024
Bug in the analyze_peaks function (not recognizing Something isn't working
matching_epsilon = NULL
)
bug
#30
by vvvirgy
was closed Apr 15, 2024
Low purity but high VAF
help wanted
Extra attention is needed
#26
by yavorska
was closed Mar 27, 2024
input somatic mutation file
help wanted
Extra attention is needed
#22
by sabrina0701
was closed Apr 6, 2023
VROOM_CONNECTION_SIZE setting
help wanted
Extra attention is needed
#21
by wt12318
was closed Mar 28, 2024
Proper cohort-frequency plot (genome wide)
enhancement
New feature or request
#18
by caravagn
was closed Sep 1, 2022
blank_genome: an alternative code
enhancement
New feature or request
#13
by qingjian1991
was closed Sep 1, 2022
plot_multisample_CNA: code error in missing setting the blank_genome
bug
Something isn't working
#12
by qingjian1991
was closed Sep 1, 2022
peak_detector_closest_hit_match() fails when all peaks discarded for a karyotype
#10
by bobamess
was closed May 5, 2021
Automatically annotate driver and interesting SNVs
enhancement
New feature or request
#7
by Militeee
was closed Apr 27, 2021
Non-numeric argument to mathematical function dbinom
bug
Something isn't working
#4
by ahorn720
was closed Nov 19, 2020
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